The following node is available in the Open Source KNIME predictive analytics and data mining platform version 2.7.1. Discover over 1000 other nodes, as well as enterprise functionality at http://knime.com.
This node allows you to parse the PubMed documents of search results (for more details see (http://www.ncbi.nlm.nih.gov/entrez/query/DTD/pubmed_060101.dtd). The specified directory will be searched for xml, gz or zip files, if recursive search is activated the subdirectories are going to be searched too. All the contained xml, gz or zip files are parsed. The document data is stored in the outgoing data table.
0 | An output table containing the parsed document data. |